Well, an engines an air pump, so to get real gains, you generally need to widen the airways all the way, front (intake) to back (tailpipes)
the idea behind cooler is that the cooler the fuel, the higher the density and a more complete burn.
You have to start somewhere .... and you could do it piece meal ...
is this s 4.0 I6 model ? or something newer ?
I assembled a motor for a friend of mine
Stock 2000 4.0 low mileage junk yard replacement motor w/Girdle
replaced the 0331 head with a 7120,
Bored Out the Throttle Assembly,
Tri-Y Header - replaced the stock cracked unit
Cat Back Exhaust - already in place from the PO
replaced the CAT with a High Flow Unit
the 99 and Newer Intake ...
a Crower 'Baja Beast' - Level 1 or 2 I cannot remember ...